mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-425p48l5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:34,526 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:35,734 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:35,962 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:29,605 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:29,936 - cnv_pipe.batch.run_model - INFO - Processing cluster 868 with 162 probes
2026-06-03 05:39:30,445 - cnv_pipe.batch.run_model.cluster868 - INFO - Child process started for cluster 868 with 162 probes
2026-06-03 05:44:28,112 - cnv_pipe.batch.run_model.cluster868 - INFO - Child process finished cluster 868. Wrote cluster_868_samples.csv and cluster_868_params.csv
2026-06-03 05:44:28,116 - cnv_pipe.batch.run_model - INFO - Cluster 868 finished in 298.18 seconds. Status: SUCCESS