File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/44/c17c712393bf851fb95a09a5a1c258/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-obtecnwb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:35:19,800 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:35:20,869 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:35:21,083 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:36:10,654 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:36:11,038 - cnv_pipe.batch.run_model - INFO - Processing cluster 71 with 169 probes
2026-06-03 05:36:11,552 - cnv_pipe.batch.run_model.cluster71 - INFO - Child process started for cluster 71 with 169 probes
2026-06-03 05:41:23,523 - cnv_pipe.batch.run_model.cluster71 - INFO - Child process finished cluster 71. Wrote cluster_71_samples.csv and cluster_71_params.csv
2026-06-03 05:41:23,526 - cnv_pipe.batch.run_model - INFO - Cluster 71 finished in 312.49 seconds. Status: SUCCESS