File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/02b59b8c84b11f233d3df4b172501c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_xjg5f5r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:39:24,128 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:39:24,879 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:39:25,042 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:40:04,958 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:40:05,123 - cnv_pipe.batch.run_model - INFO - Processing cluster 1025 with 190 probes
2026-06-03 05:40:05,489 - cnv_pipe.batch.run_model.cluster1025 - INFO - Child process started for cluster 1025 with 190 probes
2026-06-03 05:44:31,726 - cnv_pipe.batch.run_model.cluster1025 - INFO - Child process finished cluster 1025. Wrote cluster_1025_samples.csv and cluster_1025_params.csv
2026-06-03 05:44:31,727 - cnv_pipe.batch.run_model - INFO - Cluster 1025 finished in 266.60 seconds. Status: SUCCESS