mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vf07epwf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:38:41,057 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:38:41,855 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:38:42,031 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:39:28,378 - cnv_pipe.batch.run_model - INFO - Loaded data with 182 samples
2026-06-03 05:39:28,645 - cnv_pipe.batch.run_model - INFO - Processing cluster 865 with 137 probes
2026-06-03 05:39:29,033 - cnv_pipe.batch.run_model.cluster865 - INFO - Child process started for cluster 865 with 137 probes
2026-06-03 05:43:58,155 - cnv_pipe.batch.run_model.cluster865 - INFO - Child process finished cluster 865. Wrote cluster_865_samples.csv and cluster_865_params.csv
2026-06-03 05:43:58,158 - cnv_pipe.batch.run_model - INFO - Cluster 865 finished in 269.51 seconds. Status: SUCCESS