File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/43adb30e7898d52109c3e5d86e89ef/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4pg7qpmc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:19,769 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:20,802 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:20,999 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:04:38,885 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:04:39,166 - cnv_pipe.batch.run_model - INFO - Processing cluster 981 with 172 probes
2026-06-03 05:04:39,645 - cnv_pipe.batch.run_model.cluster981 - INFO - Child process started for cluster 981 with 172 probes
2026-06-03 05:07:54,265 - cnv_pipe.batch.run_model.cluster981 - INFO - Child process finished cluster 981. Wrote cluster_981_samples.csv and cluster_981_params.csv
2026-06-03 05:07:54,267 - cnv_pipe.batch.run_model - INFO - Cluster 981 finished in 195.10 seconds. Status: SUCCESS