mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-c0e9w97p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:01:29,247 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:01:30,144 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:01:30,326 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:01:47,274 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:01:47,370 - cnv_pipe.batch.run_model - INFO - Processing cluster 50 with 190 probes
2026-06-03 05:01:47,798 - cnv_pipe.batch.run_model.cluster50 - INFO - Child process started for cluster 50 with 190 probes
2026-06-03 05:05:05,343 - cnv_pipe.batch.run_model.cluster50 - INFO - Child process finished cluster 50. Wrote cluster_50_samples.csv and cluster_50_params.csv
2026-06-03 05:05:05,346 - cnv_pipe.batch.run_model - INFO - Cluster 50 finished in 197.97 seconds. Status: SUCCESS