mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qxwc50at because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:40,704 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:41,498 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:41,668 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:04:58,451 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:04:58,670 - cnv_pipe.batch.run_model - INFO - Processing cluster 939 with 184 probes
2026-06-03 05:04:59,046 - cnv_pipe.batch.run_model.cluster939 - INFO - Child process started for cluster 939 with 184 probes
2026-06-03 05:08:33,542 - cnv_pipe.batch.run_model.cluster939 - INFO - Child process finished cluster 939. Wrote cluster_939_samples.csv and cluster_939_params.csv
2026-06-03 05:08:33,544 - cnv_pipe.batch.run_model - INFO - Cluster 939 finished in 214.87 seconds. Status: SUCCESS