mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cyip3f3c because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:17,172 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:18,137 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:18,338 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:37,370 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:37,678 - cnv_pipe.batch.run_model - INFO - Processing cluster 629 with 181 probes
2026-06-03 05:03:38,184 - cnv_pipe.batch.run_model.cluster629 - INFO - Child process started for cluster 629 with 181 probes
2026-06-03 05:06:57,926 - cnv_pipe.batch.run_model.cluster629 - INFO - Child process finished cluster 629. Wrote cluster_629_samples.csv and cluster_629_params.csv
2026-06-03 05:06:57,928 - cnv_pipe.batch.run_model - INFO - Cluster 629 finished in 200.25 seconds. Status: SUCCESS