mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ktnivl0x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:43,902 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:45,017 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:45,215 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:04:04,931 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:04:05,265 - cnv_pipe.batch.run_model - INFO - Processing cluster 779 with 200 probes
2026-06-03 05:04:05,764 - cnv_pipe.batch.run_model.cluster779 - INFO - Child process started for cluster 779 with 200 probes
2026-06-03 05:07:48,581 - cnv_pipe.batch.run_model.cluster779 - INFO - Child process finished cluster 779. Wrote cluster_779_samples.csv and cluster_779_params.csv
2026-06-03 05:07:48,585 - cnv_pipe.batch.run_model - INFO - Cluster 779 finished in 223.32 seconds. Status: SUCCESS