mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ly3ck36p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:02:52,261 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:02:53,193 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:02:53,384 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:10,556 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:10,821 - cnv_pipe.batch.run_model - INFO - Processing cluster 490 with 170 probes
2026-06-03 05:03:11,281 - cnv_pipe.batch.run_model.cluster490 - INFO - Child process started for cluster 490 with 170 probes
2026-06-03 05:06:28,460 - cnv_pipe.batch.run_model.cluster490 - INFO - Child process finished cluster 490. Wrote cluster_490_samples.csv and cluster_490_params.csv
2026-06-03 05:06:28,462 - cnv_pipe.batch.run_model - INFO - Cluster 490 finished in 197.64 seconds. Status: SUCCESS