File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/de41eba87a24be33b96ef1cec925d4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l1g6gvnc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:17,307 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:18,122 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:18,292 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:34,607 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:34,874 - cnv_pipe.batch.run_model - INFO - Processing cluster 1174 with 188 probes
2026-06-03 05:05:35,287 - cnv_pipe.batch.run_model.cluster1174 - INFO - Child process started for cluster 1174 with 188 probes
2026-06-03 05:08:58,384 - cnv_pipe.batch.run_model.cluster1174 - INFO - Child process finished cluster 1174. Wrote cluster_1174_samples.csv and cluster_1174_params.csv
2026-06-03 05:08:58,386 - cnv_pipe.batch.run_model - INFO - Cluster 1174 finished in 203.51 seconds. Status: SUCCESS