mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-x5fd5s8i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:09,189 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:10,137 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:10,318 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:27,707 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:27,972 - cnv_pipe.batch.run_model - INFO - Processing cluster 588 with 196 probes
2026-06-03 05:03:28,412 - cnv_pipe.batch.run_model.cluster588 - INFO - Child process started for cluster 588 with 196 probes
2026-06-03 05:07:00,186 - cnv_pipe.batch.run_model.cluster588 - INFO - Child process finished cluster 588. Wrote cluster_588_samples.csv and cluster_588_params.csv
2026-06-03 05:07:00,190 - cnv_pipe.batch.run_model - INFO - Cluster 588 finished in 212.22 seconds. Status: SUCCESS