mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fk7c08ad because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:37,801 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:38,586 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:38,759 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:04:55,800 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:04:55,888 - cnv_pipe.batch.run_model - INFO - Processing cluster 687 with 193 probes
2026-06-03 05:04:56,385 - cnv_pipe.batch.run_model.cluster687 - INFO - Child process started for cluster 687 with 193 probes
2026-06-03 05:08:23,331 - cnv_pipe.batch.run_model.cluster687 - INFO - Child process finished cluster 687. Wrote cluster_687_samples.csv and cluster_687_params.csv
2026-06-03 05:08:23,334 - cnv_pipe.batch.run_model - INFO - Cluster 687 finished in 207.45 seconds. Status: SUCCESS