File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/467d4b1bb56c9a0207791b0759bd25/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hdjl28jx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:55,864 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:56,896 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:57,100 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:16,605 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:06:16,839 - cnv_pipe.batch.run_model - INFO - Processing cluster 1188 with 186 probes
2026-06-03 05:06:17,334 - cnv_pipe.batch.run_model.cluster1188 - INFO - Child process started for cluster 1188 with 186 probes
2026-06-03 05:10:22,784 - cnv_pipe.batch.run_model.cluster1188 - INFO - Child process finished cluster 1188. Wrote cluster_1188_samples.csv and cluster_1188_params.csv
2026-06-03 05:10:22,787 - cnv_pipe.batch.run_model - INFO - Cluster 1188 finished in 245.95 seconds. Status: SUCCESS