mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3_ru9ljk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:30,621 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:31,673 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:31,882 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:50,891 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:51,196 - cnv_pipe.batch.run_model - INFO - Processing cluster 1346 with 200 probes
2026-06-03 05:05:51,678 - cnv_pipe.batch.run_model.cluster1346 - INFO - Child process started for cluster 1346 with 200 probes
2026-06-03 05:09:24,328 - cnv_pipe.batch.run_model.cluster1346 - INFO - Child process finished cluster 1346. Wrote cluster_1346_samples.csv and cluster_1346_params.csv
2026-06-03 05:09:24,331 - cnv_pipe.batch.run_model - INFO - Cluster 1346 finished in 213.13 seconds. Status: SUCCESS