File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/5d2138a7e3af79c7db7151684dd2ca/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xmhn1b2j because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:57,583 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:58,367 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:58,533 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:13,870 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:14,101 - cnv_pipe.batch.run_model - INFO - Processing cluster 821 with 194 probes
2026-06-03 05:05:14,477 - cnv_pipe.batch.run_model.cluster821 - INFO - Child process started for cluster 821 with 194 probes
2026-06-03 05:08:44,122 - cnv_pipe.batch.run_model.cluster821 - INFO - Child process finished cluster 821. Wrote cluster_821_samples.csv and cluster_821_params.csv
2026-06-03 05:08:44,124 - cnv_pipe.batch.run_model - INFO - Cluster 821 finished in 210.02 seconds. Status: SUCCESS