mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xd9r9ljc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:03,017 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:04,073 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:04,282 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:23,257 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:23,528 - cnv_pipe.batch.run_model - INFO - Processing cluster 545 with 188 probes
2026-06-03 05:03:24,018 - cnv_pipe.batch.run_model.cluster545 - INFO - Child process started for cluster 545 with 188 probes
2026-06-03 05:06:54,484 - cnv_pipe.batch.run_model.cluster545 - INFO - Child process finished cluster 545. Wrote cluster_545_samples.csv and cluster_545_params.csv
2026-06-03 05:06:54,487 - cnv_pipe.batch.run_model - INFO - Cluster 545 finished in 210.96 seconds. Status: SUCCESS