mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vsvbhuz7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:02:42,703 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:02:43,579 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:02:43,763 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:00,373 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:00,623 - cnv_pipe.batch.run_model - INFO - Processing cluster 444 with 125 probes
2026-06-03 05:03:01,068 - cnv_pipe.batch.run_model.cluster444 - INFO - Child process started for cluster 444 with 125 probes
2026-06-03 05:05:28,526 - cnv_pipe.batch.run_model.cluster444 - INFO - Child process finished cluster 444. Wrote cluster_444_samples.csv and cluster_444_params.csv
2026-06-03 05:05:28,528 - cnv_pipe.batch.run_model - INFO - Cluster 444 finished in 147.90 seconds. Status: SUCCESS