mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-uwlxc54l because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:01,589 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:02,565 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:02,766 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:21,441 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:21,725 - cnv_pipe.batch.run_model - INFO - Processing cluster 538 with 174 probes
2026-06-03 05:03:22,155 - cnv_pipe.batch.run_model.cluster538 - INFO - Child process started for cluster 538 with 174 probes
2026-06-03 05:06:45,599 - cnv_pipe.batch.run_model.cluster538 - INFO - Child process finished cluster 538. Wrote cluster_538_samples.csv and cluster_538_params.csv
2026-06-03 05:06:45,602 - cnv_pipe.batch.run_model - INFO - Cluster 538 finished in 203.88 seconds. Status: SUCCESS