File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/94/6a9faa71a968fe5a4e2a9f06ca02ec/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vd9bcbam because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:54,039 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:55,133 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:55,334 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:14,161 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:14,267 - cnv_pipe.batch.run_model - INFO - Processing cluster 1151 with 186 probes
2026-06-03 05:05:14,750 - cnv_pipe.batch.run_model.cluster1151 - INFO - Child process started for cluster 1151 with 186 probes
2026-06-03 05:08:50,281 - cnv_pipe.batch.run_model.cluster1151 - INFO - Child process finished cluster 1151. Wrote cluster_1151_samples.csv and cluster_1151_params.csv
2026-06-03 05:08:50,287 - cnv_pipe.batch.run_model - INFO - Cluster 1151 finished in 216.02 seconds. Status: SUCCESS