File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cc/9c5046dad8db92835f21cb540579cf/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l5aau1kb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:20,271 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:21,061 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:21,231 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:37,524 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:37,611 - cnv_pipe.batch.run_model - INFO - Processing cluster 1269 with 194 probes
2026-06-03 05:05:38,152 - cnv_pipe.batch.run_model.cluster1269 - INFO - Child process started for cluster 1269 with 194 probes
2026-06-03 05:09:11,309 - cnv_pipe.batch.run_model.cluster1269 - INFO - Child process finished cluster 1269. Wrote cluster_1269_samples.csv and cluster_1269_params.csv
2026-06-03 05:09:11,312 - cnv_pipe.batch.run_model - INFO - Cluster 1269 finished in 213.70 seconds. Status: SUCCESS