mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-stjuxj92 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:59,863 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:00,846 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:01,042 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:04:19,160 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:04:19,255 - cnv_pipe.batch.run_model - INFO - Processing cluster 876 with 191 probes
2026-06-03 05:04:19,696 - cnv_pipe.batch.run_model.cluster876 - INFO - Child process started for cluster 876 with 191 probes
2026-06-03 05:07:50,977 - cnv_pipe.batch.run_model.cluster876 - INFO - Child process finished cluster 876. Wrote cluster_876_samples.csv and cluster_876_params.csv
2026-06-03 05:07:50,979 - cnv_pipe.batch.run_model - INFO - Cluster 876 finished in 211.72 seconds. Status: SUCCESS