mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-no85fyrm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:06:11,403 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:13,710 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:14,194 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:47,197 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:06:47,406 - cnv_pipe.batch.run_model - INFO - Processing cluster 749 with 135 probes
2026-06-03 05:06:48,342 - cnv_pipe.batch.run_model.cluster749 - INFO - Child process started for cluster 749 with 135 probes
2026-06-03 05:13:25,146 - cnv_pipe.batch.run_model.cluster749 - INFO - Child process finished cluster 749. Wrote cluster_749_samples.csv and cluster_749_params.csv
2026-06-03 05:13:25,148 - cnv_pipe.batch.run_model - INFO - Cluster 749 finished in 397.74 seconds. Status: SUCCESS