mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-emor9mx5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:37,737 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:38,706 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:38,890 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:04:57,337 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:04:57,616 - cnv_pipe.batch.run_model - INFO - Processing cluster 708 with 185 probes
2026-06-03 05:04:58,105 - cnv_pipe.batch.run_model.cluster708 - INFO - Child process started for cluster 708 with 185 probes
2026-06-03 05:08:18,166 - cnv_pipe.batch.run_model.cluster708 - INFO - Child process finished cluster 708. Wrote cluster_708_samples.csv and cluster_708_params.csv
2026-06-03 05:08:18,169 - cnv_pipe.batch.run_model - INFO - Cluster 708 finished in 200.55 seconds. Status: SUCCESS