mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cqxi_11r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:22,360 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:24,344 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:24,764 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:58,722 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:59,158 - cnv_pipe.batch.run_model - INFO - Processing cluster 571 with 196 probes
2026-06-03 05:04:00,174 - cnv_pipe.batch.run_model.cluster571 - INFO - Child process started for cluster 571 with 196 probes
2026-06-03 05:12:17,020 - cnv_pipe.batch.run_model.cluster571 - INFO - Child process finished cluster 571. Wrote cluster_571_samples.csv and cluster_571_params.csv
2026-06-03 05:12:17,025 - cnv_pipe.batch.run_model - INFO - Cluster 571 finished in 497.87 seconds. Status: SUCCESS