mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2p5b1r_k because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:16,690 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:17,677 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:17,866 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:35,798 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:36,088 - cnv_pipe.batch.run_model - INFO - Processing cluster 626 with 143 probes
2026-06-03 05:03:36,583 - cnv_pipe.batch.run_model.cluster626 - INFO - Child process started for cluster 626 with 143 probes
2026-06-03 05:06:24,920 - cnv_pipe.batch.run_model.cluster626 - INFO - Child process finished cluster 626. Wrote cluster_626_samples.csv and cluster_626_params.csv
2026-06-03 05:06:24,922 - cnv_pipe.batch.run_model - INFO - Cluster 626 finished in 168.83 seconds. Status: SUCCESS