mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-uhdhnn5r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:45,681 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:46,468 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:46,642 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:03,106 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:06:03,341 - cnv_pipe.batch.run_model - INFO - Processing cluster 887 with 177 probes
2026-06-03 05:06:03,723 - cnv_pipe.batch.run_model.cluster887 - INFO - Child process started for cluster 887 with 177 probes
2026-06-03 05:09:39,243 - cnv_pipe.batch.run_model.cluster887 - INFO - Child process finished cluster 887. Wrote cluster_887_samples.csv and cluster_887_params.csv
2026-06-03 05:09:39,246 - cnv_pipe.batch.run_model - INFO - Cluster 887 finished in 215.90 seconds. Status: SUCCESS