File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9d/b75f7e76f815236147051cf5398341/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kdflrqgu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:25,645 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:26,730 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:26,936 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:47,064 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:47,176 - cnv_pipe.batch.run_model - INFO - Processing cluster 1321 with 188 probes
2026-06-03 05:05:47,667 - cnv_pipe.batch.run_model.cluster1321 - INFO - Child process started for cluster 1321 with 188 probes
2026-06-03 05:09:14,242 - cnv_pipe.batch.run_model.cluster1321 - INFO - Child process finished cluster 1321. Wrote cluster_1321_samples.csv and cluster_1321_params.csv
2026-06-03 05:09:14,245 - cnv_pipe.batch.run_model - INFO - Cluster 1321 finished in 207.07 seconds. Status: SUCCESS