File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cf/83122293083c8f71a28f03b3b714d7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6ctluype because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:47,416 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:48,241 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:48,420 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:05,094 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:05,363 - cnv_pipe.batch.run_model - INFO - Processing cluster 911 with 192 probes
2026-06-03 05:05:05,793 - cnv_pipe.batch.run_model.cluster911 - INFO - Child process started for cluster 911 with 192 probes
2026-06-03 05:08:37,034 - cnv_pipe.batch.run_model.cluster911 - INFO - Child process finished cluster 911. Wrote cluster_911_samples.csv and cluster_911_params.csv
2026-06-03 05:08:37,037 - cnv_pipe.batch.run_model - INFO - Cluster 911 finished in 211.67 seconds. Status: SUCCESS