File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/9db3d6f0a382124dc20fe6397d2026/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-83c2wu26 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:38,075 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:38,863 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:39,032 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:04:55,502 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:04:55,581 - cnv_pipe.batch.run_model - INFO - Processing cluster 970 with 171 probes
2026-06-03 05:04:55,967 - cnv_pipe.batch.run_model.cluster970 - INFO - Child process started for cluster 970 with 171 probes
2026-06-03 05:08:18,387 - cnv_pipe.batch.run_model.cluster970 - INFO - Child process finished cluster 970. Wrote cluster_970_samples.csv and cluster_970_params.csv
2026-06-03 05:08:18,390 - cnv_pipe.batch.run_model - INFO - Cluster 970 finished in 202.81 seconds. Status: SUCCESS