mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ktsiowdo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:01:39,184 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:01:40,986 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:01:41,341 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:02:08,495 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:02:08,742 - cnv_pipe.batch.run_model - INFO - Processing cluster 60 with 199 probes
2026-06-03 05:02:09,342 - cnv_pipe.batch.run_model.cluster60 - INFO - Child process started for cluster 60 with 199 probes
2026-06-03 05:07:12,235 - cnv_pipe.batch.run_model.cluster60 - INFO - Child process finished cluster 60. Wrote cluster_60_samples.csv and cluster_60_params.csv
2026-06-03 05:07:12,239 - cnv_pipe.batch.run_model - INFO - Cluster 60 finished in 303.50 seconds. Status: SUCCESS