mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tggu0rk0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:02:50,204 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:02:51,224 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:02:51,414 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:10,281 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:10,602 - cnv_pipe.batch.run_model - INFO - Processing cluster 478 with 199 probes
2026-06-03 05:03:11,053 - cnv_pipe.batch.run_model.cluster478 - INFO - Child process started for cluster 478 with 199 probes
2026-06-03 05:06:46,882 - cnv_pipe.batch.run_model.cluster478 - INFO - Child process finished cluster 478. Wrote cluster_478_samples.csv and cluster_478_params.csv
2026-06-03 05:06:46,886 - cnv_pipe.batch.run_model - INFO - Cluster 478 finished in 216.28 seconds. Status: SUCCESS