mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-74e3fcit because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:17,502 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:19,243 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:19,582 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:48,919 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:49,276 - cnv_pipe.batch.run_model - INFO - Processing cluster 594 with 188 probes
2026-06-03 05:03:50,118 - cnv_pipe.batch.run_model.cluster594 - INFO - Child process started for cluster 594 with 188 probes
2026-06-03 05:08:53,337 - cnv_pipe.batch.run_model.cluster594 - INFO - Child process finished cluster 594. Wrote cluster_594_samples.csv and cluster_594_params.csv
2026-06-03 05:08:53,340 - cnv_pipe.batch.run_model - INFO - Cluster 594 finished in 304.06 seconds. Status: SUCCESS