mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-96meh50r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:02:59,931 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:01,314 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:01,631 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:28,261 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:28,400 - cnv_pipe.batch.run_model - INFO - Processing cluster 505 with 181 probes
2026-06-03 05:03:29,100 - cnv_pipe.batch.run_model.cluster505 - INFO - Child process started for cluster 505 with 181 probes
2026-06-03 05:08:05,802 - cnv_pipe.batch.run_model.cluster505 - INFO - Child process finished cluster 505. Wrote cluster_505_samples.csv and cluster_505_params.csv
2026-06-03 05:08:05,803 - cnv_pipe.batch.run_model - INFO - Cluster 505 finished in 277.40 seconds. Status: SUCCESS