mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-w321405z because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:03:06,833 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:03:07,735 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:03:07,911 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:24,595 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:24,685 - cnv_pipe.batch.run_model - INFO - Processing cluster 576 with 194 probes
2026-06-03 05:03:25,132 - cnv_pipe.batch.run_model.cluster576 - INFO - Child process started for cluster 576 with 194 probes
2026-06-03 05:06:31,199 - cnv_pipe.batch.run_model.cluster576 - INFO - Child process finished cluster 576. Wrote cluster_576_samples.csv and cluster_576_params.csv
2026-06-03 05:06:31,201 - cnv_pipe.batch.run_model - INFO - Cluster 576 finished in 186.52 seconds. Status: SUCCESS