mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-snrivb7d because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:02:46,450 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:02:47,446 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:02:47,642 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:03:07,886 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:03:08,177 - cnv_pipe.batch.run_model - INFO - Processing cluster 460 with 160 probes
2026-06-03 05:03:08,638 - cnv_pipe.batch.run_model.cluster460 - INFO - Child process started for cluster 460 with 160 probes
2026-06-03 05:06:10,963 - cnv_pipe.batch.run_model.cluster460 - INFO - Child process finished cluster 460. Wrote cluster_460_samples.csv and cluster_460_params.csv
2026-06-03 05:06:10,965 - cnv_pipe.batch.run_model - INFO - Cluster 460 finished in 182.79 seconds. Status: SUCCESS