mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y2y0lg2h because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:02:34,749 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:02:35,681 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:02:35,864 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:02:53,074 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:02:53,298 - cnv_pipe.batch.run_model - INFO - Processing cluster 95 with 190 probes
2026-06-03 05:02:53,746 - cnv_pipe.batch.run_model.cluster95 - INFO - Child process started for cluster 95 with 190 probes
2026-06-03 05:06:23,255 - cnv_pipe.batch.run_model.cluster95 - INFO - Child process finished cluster 95. Wrote cluster_95_samples.csv and cluster_95_params.csv
2026-06-03 05:06:23,258 - cnv_pipe.batch.run_model - INFO - Cluster 95 finished in 209.96 seconds. Status: SUCCESS