mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h1vjg_pr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:02:40,254 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:02:41,276 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:02:41,472 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:02:58,963 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:02:59,233 - cnv_pipe.batch.run_model - INFO - Processing cluster 122 with 180 probes
2026-06-03 05:02:59,676 - cnv_pipe.batch.run_model.cluster122 - INFO - Child process started for cluster 122 with 180 probes
2026-06-03 05:06:37,070 - cnv_pipe.batch.run_model.cluster122 - INFO - Child process finished cluster 122. Wrote cluster_122_samples.csv and cluster_122_params.csv
2026-06-03 05:06:37,073 - cnv_pipe.batch.run_model - INFO - Cluster 122 finished in 217.84 seconds. Status: SUCCESS