mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-87ik_g77 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:02:32,253 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:02:33,130 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:02:33,308 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:02:49,995 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:02:50,256 - cnv_pipe.batch.run_model - INFO - Processing cluster 87 with 186 probes
2026-06-03 05:02:50,707 - cnv_pipe.batch.run_model.cluster87 - INFO - Child process started for cluster 87 with 186 probes
2026-06-03 05:06:12,407 - cnv_pipe.batch.run_model.cluster87 - INFO - Child process finished cluster 87. Wrote cluster_87_samples.csv and cluster_87_params.csv
2026-06-03 05:06:12,410 - cnv_pipe.batch.run_model - INFO - Cluster 87 finished in 202.15 seconds. Status: SUCCESS