File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c8/fb5769dd91b68e700327fe7b354479/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-p3wwlpwp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:24,418 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:25,480 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:25,681 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:44,806 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:45,131 - cnv_pipe.batch.run_model - INFO - Processing cluster 926 with 192 probes
2026-06-03 05:05:45,637 - cnv_pipe.batch.run_model.cluster926 - INFO - Child process started for cluster 926 with 192 probes
2026-06-03 05:09:14,882 - cnv_pipe.batch.run_model.cluster926 - INFO - Child process finished cluster 926. Wrote cluster_926_samples.csv and cluster_926_params.csv
2026-06-03 05:09:14,885 - cnv_pipe.batch.run_model - INFO - Cluster 926 finished in 209.75 seconds. Status: SUCCESS