File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b9/895c26e61c3b3504a00487f2e73af6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-83f8vh0g because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:45,631 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:46,504 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:46,684 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:03,006 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:06:03,094 - cnv_pipe.batch.run_model - INFO - Processing cluster 817 with 132 probes
2026-06-03 05:06:03,621 - cnv_pipe.batch.run_model.cluster817 - INFO - Child process started for cluster 817 with 132 probes
2026-06-03 05:08:33,097 - cnv_pipe.batch.run_model.cluster817 - INFO - Child process finished cluster 817. Wrote cluster_817_samples.csv and cluster_817_params.csv
2026-06-03 05:08:33,100 - cnv_pipe.batch.run_model - INFO - Cluster 817 finished in 150.01 seconds. Status: SUCCESS