File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/42/df8f683c39bafab6e84369611ee2c4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ljwm2r1_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:59,121 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:00,436 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:00,718 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:25,412 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:06:25,693 - cnv_pipe.batch.run_model - INFO - Processing cluster 790 with 185 probes
2026-06-03 05:06:26,333 - cnv_pipe.batch.run_model.cluster790 - INFO - Child process started for cluster 790 with 185 probes
2026-06-03 05:11:21,571 - cnv_pipe.batch.run_model.cluster790 - INFO - Child process finished cluster 790. Wrote cluster_790_samples.csv and cluster_790_params.csv
2026-06-03 05:11:21,574 - cnv_pipe.batch.run_model - INFO - Cluster 790 finished in 295.88 seconds. Status: SUCCESS