File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/ab066dbab30cdd1924b8c6bda45b22/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1xmdaun_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:06:27,635 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:28,623 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:28,816 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:46,264 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:06:46,512 - cnv_pipe.batch.run_model - INFO - Processing cluster 915 with 190 probes
2026-06-03 05:06:46,948 - cnv_pipe.batch.run_model.cluster915 - INFO - Child process started for cluster 915 with 190 probes
2026-06-03 05:10:13,061 - cnv_pipe.batch.run_model.cluster915 - INFO - Child process finished cluster 915. Wrote cluster_915_samples.csv and cluster_915_params.csv
2026-06-03 05:10:13,064 - cnv_pipe.batch.run_model - INFO - Cluster 915 finished in 206.55 seconds. Status: SUCCESS