mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-plzni90m because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:39,574 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:41,290 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:41,638 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:10,813 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:06:11,168 - cnv_pipe.batch.run_model - INFO - Processing cluster 745 with 177 probes
2026-06-03 05:06:11,938 - cnv_pipe.batch.run_model.cluster745 - INFO - Child process started for cluster 745 with 177 probes
2026-06-03 05:11:08,997 - cnv_pipe.batch.run_model.cluster745 - INFO - Child process finished cluster 745. Wrote cluster_745_samples.csv and cluster_745_params.csv
2026-06-03 05:11:09,000 - cnv_pipe.batch.run_model - INFO - Cluster 745 finished in 297.83 seconds. Status: SUCCESS