mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-n3hvr6y8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:36,014 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:37,029 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:37,241 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:04:56,235 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:04:56,507 - cnv_pipe.batch.run_model - INFO - Processing cluster 683 with 179 probes
2026-06-03 05:04:56,971 - cnv_pipe.batch.run_model.cluster683 - INFO - Child process started for cluster 683 with 179 probes
2026-06-03 05:08:21,154 - cnv_pipe.batch.run_model.cluster683 - INFO - Child process finished cluster 683. Wrote cluster_683_samples.csv and cluster_683_params.csv
2026-06-03 05:08:21,158 - cnv_pipe.batch.run_model - INFO - Cluster 683 finished in 204.65 seconds. Status: SUCCESS