mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xbphfotb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:04:57,619 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:04:58,691 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:04:58,907 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:17,794 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:18,103 - cnv_pipe.batch.run_model - INFO - Processing cluster 787 with 175 probes
2026-06-03 05:05:18,582 - cnv_pipe.batch.run_model.cluster787 - INFO - Child process started for cluster 787 with 175 probes
2026-06-03 05:08:39,358 - cnv_pipe.batch.run_model.cluster787 - INFO - Child process finished cluster 787. Wrote cluster_787_samples.csv and cluster_787_params.csv
2026-06-03 05:08:39,360 - cnv_pipe.batch.run_model - INFO - Cluster 787 finished in 201.26 seconds. Status: SUCCESS