mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nry6gfc9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:02:32,443 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:02:33,388 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:02:33,574 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:02:51,416 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:02:51,701 - cnv_pipe.batch.run_model - INFO - Processing cluster 85 with 190 probes
2026-06-03 05:02:52,163 - cnv_pipe.batch.run_model.cluster85 - INFO - Child process started for cluster 85 with 190 probes
2026-06-03 05:06:22,362 - cnv_pipe.batch.run_model.cluster85 - INFO - Child process finished cluster 85. Wrote cluster_85_samples.csv and cluster_85_params.csv
2026-06-03 05:06:22,363 - cnv_pipe.batch.run_model - INFO - Cluster 85 finished in 210.66 seconds. Status: SUCCESS