mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5sekq177 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:06:03,346 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:04,145 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:04,315 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:21,728 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:06:21,928 - cnv_pipe.batch.run_model - INFO - Processing cluster 1079 with 174 probes
2026-06-03 05:06:22,306 - cnv_pipe.batch.run_model.cluster1079 - INFO - Child process started for cluster 1079 with 174 probes
2026-06-03 05:09:37,648 - cnv_pipe.batch.run_model.cluster1079 - INFO - Child process finished cluster 1079. Wrote cluster_1079_samples.csv and cluster_1079_params.csv
2026-06-03 05:09:37,651 - cnv_pipe.batch.run_model - INFO - Cluster 1079 finished in 195.72 seconds. Status: SUCCESS