mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kmkrz3ny because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:05:30,804 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:05:31,755 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:05:31,949 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:05:48,886 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:05:49,065 - cnv_pipe.batch.run_model - INFO - Processing cluster 960 with 172 probes
2026-06-03 05:05:49,529 - cnv_pipe.batch.run_model.cluster960 - INFO - Child process started for cluster 960 with 172 probes
2026-06-03 05:08:48,565 - cnv_pipe.batch.run_model.cluster960 - INFO - Child process finished cluster 960. Wrote cluster_960_samples.csv and cluster_960_params.csv
2026-06-03 05:08:48,566 - cnv_pipe.batch.run_model - INFO - Cluster 960 finished in 179.50 seconds. Status: SUCCESS