File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/43080507d4ac2e88547b5fa7e1a45a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nbs_hter because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:06:37,257 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:06:38,239 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:06:38,435 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:06:56,917 - cnv_pipe.batch.run_model - INFO - Loaded data with 71 samples
2026-06-03 05:06:57,259 - cnv_pipe.batch.run_model - INFO - Processing cluster 1134 with 168 probes
2026-06-03 05:06:57,751 - cnv_pipe.batch.run_model.cluster1134 - INFO - Child process started for cluster 1134 with 168 probes
2026-06-03 05:10:08,412 - cnv_pipe.batch.run_model.cluster1134 - INFO - Child process finished cluster 1134. Wrote cluster_1134_samples.csv and cluster_1134_params.csv
2026-06-03 05:10:08,415 - cnv_pipe.batch.run_model - INFO - Cluster 1134 finished in 191.16 seconds. Status: SUCCESS